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SNP Report
Name | rs7789727 dbSNP Ensembl | ||
---|---|---|---|
Location | chrCHR_HSCHR7_1_CTG4_4:103182239 - 103182239(-1) | ||
Variant Alleles | G/A | ||
Ancestral Allele | A | ||
Minor Allele | A | ||
Minor Allele Frequence | 0.170128 | ||
Functional Annotation | 5_prime_UTR_variant; downstream_gene_variant; intron_variant; upstream_gene_variant; non_coding_transcript_variant. | ||
Consequence to Transcript | 5_prime_UTR_variant(ENST00000341533, ENST00000417955, ENST00000418294, ENST00000425379, ENST00000465647); downstream_gene_variant(ENST00000426806); intron_variant(ENST00000427257); upstream_gene_variant(ENST00000422589, ENST00000479761, ENST00000631820, ENST00000631940, ENST00000632400, ENST00000632491, ENST00000633207); non_coding_transcript_variant(ENST00000631820, ENST00000631940, ENST00000632400, ENST00000632491, ENST00000633207) | ||
No. of Studies | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | NO | ||
Overlap with MDD? | NO |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.