BDgene

SNP Report

Basic Info
Name rs7646250 dbSNP Ensembl
Location chr3:193616804 - 193616804(1)
Variant Alleles A/T
Ancestral Allele T
Minor Allele T
Minor Allele Frequence 0.49361
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000433105, ENST00000444085); intron_variant(ENST00000361150, ENST00000361510, ENST00000361715, ENST00000361828, ENST00000361908, ENST00000392436, ENST00000392437, ENST00000392438, ENST00000419435, ENST00000434811, ENST00000487986, LRG_337t1, LRG_337t2); non_coding_transcript_variant(ENST00000487986); upstream_gene_variant(ENST00000497189)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
OPA1 optic atrophy 1 (autosomal dominant) 3q29 1(0/1/0)
OPA1-AS1 OPA1 antisense RNA 1 3q29 Mapped by Literature SNP

SNPs in LD with rs7646250 (count: 0) View in gBrowse (chr3:193616804..193616804 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)