SNP Report

Basic Info
Name rs75841596 dbSNP Ensembl
Location chr19:14053817 - 14053817(1)
Variant Alleles C/T
Minor Allele T
Minor Allele Frequence 0.0115815
Functional Annotation downstream_gene_variant; missense_variant.
Polyphen Annotation: possibly damaging(ENST00000340790)
SIFT Annotation: deleterious(ENST00000340790)
Consequence to Transcript downstream_gene_variant(ENST00000263379, ENST00000586368, ENST00000589048); missense_variant(ENST00000340790)
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Georgi, B., 2014 C/T 9 in BPI, 11 in Well 9 in BPI, 11 in Well Top 30 Amish-specific putative damaging exonic missense vari...... Top 30 Amish-specific putative damaging exonic missense variants by prevalence in affected individuals. More... Trend

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PALM3 paralemmin 3 19p13.12 1(0/0/1)
IL27RA interleukin 27 receptor, alpha 19p13.11 Mapped by Literature SNP

SNPs in LD with rs75841596 (count: 0) View in gBrowse (chr19:14053817..14053817 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)