SNP Report

Basic Info

Name	rs75841596 dbSNP Ensembl
Location	chr19:14053817 - 14053817(1)
Variant Alleles	C/T
Minor Allele	T
Minor Allele Frequence	0.0115815
Functional Annotation	downstream_gene_variant; missense_variant. Polyphen Annotation: possibly damaging(ENST00000340790) SIFT Annotation: deleterious(ENST00000340790)
Consequence to Transcript	downstream_gene_variant(ENST00000263379, ENST00000586368, ENST00000589048); missense_variant(ENST00000340790)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Georgi, B., 2014	C/T		9 in BPI, 11 in Well 9 in BPI, 11 in Well	Top 30 Amish-specific putative damaging exonic missense vari...... Top 30 Amish-specific putative damaging exonic missense variants by prevalence in affected individuals. More...	Trend

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PALM3	paralemmin 3	19p13.12	1(0/0/1)
IL27RA	interleukin 27 receptor, alpha	19p13.11	Mapped by Literature SNP

SNPs in LD with rs75841596 (count: 0) View in gBrowse (chr19:14053817..14053817 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)