BDgene

SNP Report

Basic Info
Name rs7333687 dbSNP Ensembl
Location chr13:98838305 - 98838305(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.458067
Functional Annotation downstream_gene_variant; intron_variant; NMD_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000439367); intron_variant(ENST00000339416, ENST00000340449, ENST00000376460, ENST00000442173, ENST00000448493, ENST00000449796, ENST00000450257, ENST00000630992); NMD_transcript_variant(ENST00000339416, ENST00000630992)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Detera-Wadleigh, S. D., 2007 FBAT-e P-value = 0.352 in NIMH1-2, FBAT-e P-value = 0.8518 i...... FBAT-e P-value = 0.352 in NIMH1-2, FBAT-e P-value = 0.8518 in NIMH3, FBAT-e P-value = 0.3033 in NIMH4 More... no significant over-transmission of any alleles was detected no significant over-transmission of any alleles was detected Negative

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DOCK9 dedicator of cytokinesis 9 13q32.3 1(1/0/0)
DOCK9-AS1 DOCK9 antisense RNA 1 13q32.3 Mapped by Literature SNP

SNPs in LD with rs7333687 (count: 0) View in gBrowse (chr13:98838305..98838305 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)