BDgene

SNP Report

Basic Info
Name rs7071307 dbSNP Ensembl
Location chr10:131557326 - 131557326(1)
Variant Alleles A/C
Ancestral Allele C
Minor Allele A
Minor Allele Frequence 0.374401
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? YES
Overlap with MDD? YES

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Huang, J.,2010 A/C Omnibus GWAS Test: P-value = 0.0000195, best-fit model is Bi...... Omnibus GWAS Test: P-value = 0.0000195, best-fit model is Bipolar II specific More... Suggestive association was found. Suggestive association was found. Trend

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PPP2R2D protein phosphatase 2, regulatory subunit B, delta 10q26.3 1(0/0/1)

SNPs in LD with rs7071307 (count: 0) View in gBrowse (chr10:131557326..131557326 )

Overlap with SZ from cross-disorder studies (count: 1)
Reference Statistical Result Description Result Category
Huang, J.,2010 Omnibus GWAS Test:P-value > 5E-05 No significant association was observed. Negative

Overlap with MDD from cross-disorder studies (count: 1)
Reference Statistical Result Description Result Category
Huang, J.,2010 Omnibus GWAS Test:P-value > 5E-05 No significant association was observed. Negative

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016