SNP Report

Basic Info

Name	rs6778844 dbSNP Ensembl
Location	chr3:52562382 - 52562382(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.316294
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000408591); intron_variant(ENST00000296302, ENST00000337303, ENST00000356770, ENST00000394830, ENST00000409057, ENST00000409114, ENST00000409767, ENST00000410007, ENST00000412587, ENST00000423351, ENST00000476842); NMD_transcript_variant(ENST00000412587)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
RNU6ATAC16P	RNA, U6atac small nuclear 16, pseudogene	3p21.1	Mapped by LD-proxy
SMIM4	small integral membrane protein 4	3p21.1	Mapped by Literature SNP
PBRM1	polybromo 1	3p21	5(4/0/1)

SNPs in LD with rs6778844 (count: 0) View in gBrowse (chr3:52562382..52562382 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)