SNP Report

Basic Info

Name	rs6606854 dbSNP Ensembl
Location	chr15:26914049 - 26914049(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.386981
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000335625, ENST00000355395, ENST00000400081, ENST00000541819, ENST00000555182, ENST00000557449); non_coding_transcript_variant(ENST00000557449)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Otani, K.,2005(a)	C/T		Chi-square test: for BPD, genotype P-value = 0.66, allele P-...... Chi-square test: for BPD, genotype P-value = 0.66, allele P-value = 0.84; for BPD1, genotype P-value = 0.64, allele P-value = 0.45; for BPD2, genotype P-value = 0.43, allele P-value = 0.33 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GABRA5	gamma-aminobutyric acid (GABA) A receptor, alpha 5	15q12	6(6/0/0)
GABRB3	gamma-aminobutyric acid (GABA) A receptor, beta 3	15q12	3(1/2/0)

SNPs in LD with rs6606854 (count: 0) View in gBrowse (chr15:26914049..26914049 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)