SNP Report

Basic Info

Name	rs660652 dbSNP Ensembl
Location	chr15:78595490 - 78595490(1)
Variant Alleles	A/G
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.256989
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	3_prime_UTR_variant(ENST00000326828); downstream_gene_variant(ENST00000299565, ENST00000394802, ENST00000559554, ENST00000559576, ENST00000624172); intron_variant(ENST00000348639, ENST00000559002, ENST00000559658); NMD_transcript_variant(ENST00000559658); non_coding_transcript_variant(ENST00000559002); upstream_gene_variant(ENST00000567141)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CHRNA5	cholinergic receptor, nicotinic, alpha 5 (neuronal)	15q24	3(2/1/0)
CHRNA3	cholinergic receptor, nicotinic, alpha 3 (neuronal)	15q24	3(1/2/0)

SNPs in LD with rs660652 (count: 0) View in gBrowse (chr15:78595490..78595490 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)