SNP Report

Basic Info

Name	rs6214 dbSNP Ensembl
Location	chr12:102399791 - 102399791(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.426917
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant; intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant.
Consequence to Transcript	3_prime_UTR_variant(ENST00000337514, ENST00000456098); downstream_gene_variant(ENST00000392904, ENST00000392905, ENST00000424202, ENST00000481539); intron_variant(ENST00000635615); non_coding_transcript_exon_variant(ENST00000626826); non_coding_transcript_variant(ENST00000626826, ENST00000635615)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Pereira, A. C.,2011	G/A		X² tests: X²=0.415, P-value = 0.519 X² tests: X²=0.415, P-value = 0.519	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
IGF1	insulin-like growth factor 1 (somatomedin C)	12q23.2	1(1/0/0)

SNPs in LD with rs6214 (count: 0) View in gBrowse (chr12:102399791..102399791 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)