SNP Report

Basic Info

Name	rs6079468 dbSNP Ensembl
Location	chr20:14517750 - 14517750(1)
Variant Alleles	A/C
Ancestral Allele	A
Minor Allele	C
Minor Allele Frequence	0.124401
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000217246, ENST00000463861, ENST00000490428, ENST00000494602); non_coding_transcript_variant(ENST00000463861, ENST00000490428, ENST00000494602)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Chen, D. T.,2011		C	Meta-analysis results by ancestry: European and Asian-ancest...... Meta-analysis results by ancestry: European and Asian-ancestry phase I samples: Fixed effects P-value = 4.50E-07, Random effects P-value = 2.11E-05, I²=33.08, Q test=7.47, Q test P-value = 0.188; European-ancestry phase I and phase II samples: Fixed effects P-value = 7.52E-07, Random effects P-value = 0.00014, I²=0, Q test=3.95, Q test P-value = 0.413 More...	No significant association was observed in BD. No significant association was observed in BD.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MACROD2	MACRO domain containing 2	20p12.1	2(0/1/1)

SNPs in LD with rs6079468 (count: 0) View in gBrowse (chr20:14517750..14517750 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)