SNP Report

Basic Info

Name	rs602435 dbSNP Ensembl
Location	chr11:107532792 - 107532792(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.0523163
Functional Annotation	intron_variant; NMD_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000260318, ENST00000389568, ENST00000393100, ENST00000417449, ENST00000428149, ENST00000429370); NMD_transcript_variant(ENST00000260318, ENST00000393100)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Xu, W., 2014	T/C		P-value=5.7E-05 P-value=5.7E-05	Top 132 SNPs (showing suggestive association to BD in our CA...... Top 132 SNPs (showing suggestive association to BD in our CAMH family cohort: p<0.0001). More...	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ALKBH8	alkB, alkylation repair homolog 8 (E. coli)	11q22.3	1(0/1/0)

SNPs in LD with rs602435 (count: 0) View in gBrowse (chr11:107532792..107532792 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)