BDgene

SNP Report

Basic Info
Name rs5758108 dbSNP Ensembl
Location chr22:40854435 - 40854435(1)
Variant Alleles G/T
Ancestral Allele G
Minor Allele T
Minor Allele Frequence 0.0858626
Functional Annotation intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000216218, ENST00000411695, ENST00000455824, ENST00000620312); NMD_transcript_variant(ENST00000455824); upstream_gene_variant(ENST00000357137, ENST00000417688, ENST00000428799, ENST00000482652, ENST00000614001)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
XPNPEP3 X-prolyl aminopeptidase 3, mitochondrial 22q13.2 Mapped by LD-proxy
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 22q13.2 1(1/0/0)

SNPs in LD with rs5758108 (count: 0) View in gBrowse (chr22:40854435..40854435 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)