SNP Report

Basic Info
Name rs550455 dbSNP Ensembl
Location chr19:48633258 - 48633258(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.413139
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000601104); downstream_gene_variant(ENST00000084798, ENST00000245222, ENST00000340932, ENST00000426514, ENST00000594088, ENST00000596080, ENST00000597434, ENST00000598088, ENST00000599029, ENST00000599267, ENST00000599748, ENST00000600537, ENST00000601712); intron_variant(ENST00000222122, ENST00000593500, ENST00000599385); non_coding_transcript_exon_variant(ENST00000594723); non_coding_transcript_variant(ENST00000594723); upstream_gene_variant(ENST00000430145, ENST00000474419, ENST00000483163)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 4)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DBP D site of albumin promoter (albumin D-box) binding protein 19q13.33 3(0/3/0)
CA11 carbonic anhydrase XI 19q13.3 Mapped by Literature SNP
SEC1P secretory blood group 1, pseudogene 19q13.33 Mapped by Literature SNP
SPHK2 sphingosine kinase 2 19q13.33 Mapped by Literature SNP

SNPs in LD with rs550455 (count: 0) View in gBrowse (chr19:48633258..48633258 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)