SNP Report

Basic Info

Name	rs4916598 dbSNP Ensembl
Location	chr3:197026484 - 197026484(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.360623
Functional Annotation	intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000296350, ENST00000296351, ENST00000439320, ENST00000491399); non_coding_transcript_exon_variant(ENST00000473501); non_coding_transcript_variant(ENST00000473501, ENST00000491399); upstream_gene_variant(ENST00000489445)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Schosser, A.,2011			chi-square (X²) test: genotype, X²=0.0...... chi-square (X²) test: genotype, X²=0.047, P-value = 0.977; allele, X²=0.03, P-value = 0.852 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MFI2	antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5	3q28-q29	Mapped by Literature SNP

SNPs in LD with rs4916598 (count: 0) View in gBrowse (chr3:197026484..197026484 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)