SNP Report

Basic Info

Name	rs45602133 dbSNP Ensembl
Location	chr10:62813552 - 62813552(1)
Variant Alleles	T/G
Ancestral Allele	T
Minor Allele	G
Minor Allele Frequence	0.076877
Functional Annotation	downstream_gene_variant; synonymous_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000493899, ENST00000637191); synonymous_variant(ENST00000242480, ENST00000411732, ENST00000439032, LRG_239t1)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Kim, S. H.,2011	T/G		For BD, chi-square tests: allele, OR=1.059, X²=0....... For BD, chi-square tests: allele, OR=1.059, X²=0.1213, P-value = 0.7276, P-value(permutation)=0.9994; Fisher's exact test, genotype, X²=0.4186, P-value = 0.8112 More...	Significant associations were found in both allele and genot...... Significant associations were found in both allele and genotype association. More...	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
EGR2	early growth response 2	10q21.1	3(1/2/0)

SNPs in LD with rs45602133 (count: 0) View in gBrowse (chr10:62813552..62813552 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Kim, S. H.,2011	For SZ, chi-square tests:allele, OR=0.846, X²=0.7658, P-value = 0.3815, P-value(permutation)=0.9064;Fisher's exact test, genotype, X²=1.1279, P-value = 0.569	No significant association was observed.	Negative

Overlap with MDD from cross-disorder studies (count: 0)