BDgene

SNP Report

Basic Info
Name rs455219 dbSNP Ensembl
Location chr4:186700910 - 186700910(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.383986
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000441802, ENST00000614102)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Abou Jamra, R, 2008 (a) A/G allelic P-value = 0.26314 allelic P-value = 0.26314 showed no association with bipolar affective disorder showed no association with bipolar affective disorder Negative

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CD36 CD36 molecule (thrombospondin receptor) 7q11.2 3(2/1/0)
FAT1 FAT atypical cadherin 1 4q35.2 Mapped by Literature SNP

SNPs in LD with rs455219 (count: 2) View in gBrowse (chr4:186700910..186719101 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016