SNP Report

Basic Info
Name rs442174 dbSNP Ensembl
Location chrCHR_HSCHR6_MHC_COX_CTG1:28524330 - 28524330(1)
Variant Alleles T/A
Ancestral Allele T
Minor Allele A
Minor Allele Frequence 0.0688898
Functional Annotation intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000483058); non_coding_transcript_variant(ENST00000483058); upstream_gene_variant(ENST00000412168, ENST00000442674, ENST00000469384, ENST00000483784, ENST00000550775, ENST00000551639)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GPX5 glutathione peroxidase 5 6p22.1 Mapped by LD-proxy
GPX6 glutathione peroxidase 6 6p22.1 1(1/0/0)

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)