SNP Report

Basic Info

Name	rs442174 dbSNP Ensembl
Location	chrCHR_HSCHR6_MHC_COX_CTG1:28524330 - 28524330(1)
Variant Alleles	T/A
Ancestral Allele	T
Minor Allele	A
Minor Allele Frequence	0.0688898
Functional Annotation	intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000483058); non_coding_transcript_variant(ENST00000483058); upstream_gene_variant(ENST00000412168, ENST00000442674, ENST00000469384, ENST00000483784, ENST00000550775, ENST00000551639)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GPX5	glutathione peroxidase 5	6p22.1	Mapped by LD-proxy
GPX6	glutathione peroxidase 6	6p22.1	1(1/0/0)

SNPs in LD with rs442174 (count: 0) View in gBrowse (chrCHR_HSCHR6_MHC_COX_CTG1:28524330..28524330 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)