BDgene

SNP Report

Basic Info
Name rs4247671 dbSNP Ensembl
Location chr6:122770347 - 122770347(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele G
Minor Allele Frequence 0.192292
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Iwayama, Y., 2010 A/G P-value for allele test is 0.3693, p-value for genotype test...... P-value for allele test is 0.3693, p-value for genotype test is 0.2028, p-value is 0.9979 after correction by permutation test. More... Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
FABP7 fatty acid binding protein 7, brain 6q22-q23 1(1/0/0)

SNPs in LD with rs4247671 (count: 2) View in gBrowse (chr6:122769987..122773794 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
To view this website normally, please make sure to allow Flash to run from the local filesystem in the security settings panel.
Last update: March 31, 2016