BDgene

SNP Report

Basic Info
Name rs423804 dbSNP Ensembl
Location chr21:14725134 - 14725134(1)
Variant Alleles C/T
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.095647
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Djurovic, S.,2010 Combined analysis: J4for Iceland (replication sample): P-val...... Combined analysis: J4for Iceland (replication sample): P-value = 0.040931, OR=0.78, Stouffer's z value=0.0024 More... No significant association was observed in BD. No significant association was observed in BD. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NRIP1 nuclear receptor interacting protein 1 21q11.2 1(0/1/0)

SNPs in LD with rs423804 (count: 2) View in gBrowse (chr21:14725134..14740414 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)