SNP Report

Basic Info

Name	rs3900362 dbSNP Ensembl
Location	chr12:51714246 - 51714246(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	C
Minor Allele Frequence	0.304712
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000354534, ENST00000355133, ENST00000545061, ENST00000550891, ENST00000551216, ENST00000599343, ENST00000627620, ENST00000637709); NMD_transcript_variant(ENST00000637709); non_coding_transcript_variant(ENST00000550891); upstream_gene_variant(ENST00000547726)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SCN8A	sodium channel, voltage gated, type VIII alpha subunit	12q13.1	1(1/0/0)
HNRNPA3P10	heterogeneous nuclear ribonucleoprotein A3 pseudogene 10	12q13.13	Mapped by LD-proxy

SNPs in LD with rs3900362 (count: 0) View in gBrowse (chr12:51714246..51714246 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)