BDgene

SNP Report

Basic Info
Name rs3787728 dbSNP Ensembl
Location chr21:36071595 - 36071595(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.270168
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000363343, ENST00000415147, ENST00000439427, ENST00000466328); intron_variant(ENST00000290349, ENST00000399191, ENST00000399201, ENST00000530908, ENST00000535199); non_coding_transcript_variant(ENST00000535199)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
RNU6-992P RNA, U6 small nuclear 992, pseudogene 21q22.12 Mapped by LD-proxy
CBR1 carbonyl reductase 1 21q22.1 Mapped by LD-proxy
SETD4 SET domain containing 4 21q22.13 1(1/0/0)

SNPs in LD with rs3787728 (count: 0) View in gBrowse (chr21:36071595..36071595 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)