BDgene

SNP Report

Basic Info
Name rs3782219 dbSNP Ensembl
Location chr12:117350435 - 117350435(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.180312
Functional Annotation intron_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000317775, ENST00000477584, ENST00000549189, ENST00000618760); non_coding_transcript_variant(ENST00000477584, ENST00000549189)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Yosifova, A.,2009 C/T Allelic association: P-value = 0.42 Allelic association: P-value = 0.42 No significant association was observed No significant association was observed Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NOS1 nitric oxide synthase 1 (neuronal) 12q24.22 8(2/5/1)

SNPs in LD with rs3782219 (count: 0) View in gBrowse (chr12:117350435..117350435 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)