BDgene

SNP Report

Basic Info
Name rs362719 dbSNP Ensembl
Location chr7:103545430 - 103545430(1)
Variant Alleles C/A
Ancestral Allele A
Minor Allele A
Minor Allele Frequence 0.416733
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000343529, ENST00000424685, ENST00000428762)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Goes, F. S., 2010 C TDT test: P-value = 5.95E-4 OR=1.47[1.18-1.82] for all sampl...... TDT test: P-value = 5.95E-4 OR=1.47[1.18-1.82] for all samples, P-value = 8.95E-5 OR=1.79[1.33-2.44] for females, P-value = 0.49 OR=1.12[0.80-1.59] for males. More... nominal significant and association remained significant aft...... nominal significant and association remained significant after empirical correction for testing of multiple markers; the strongest evidence of transmission distortion continued to be in affected females. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
RELN reelin 7q22 3(1/2/0)

SNPs in LD with rs362719 (count: 0) View in gBrowse (chr7:103545430..103545430 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)