SNP Report

Basic Info

Name	rs3111397 dbSNP Ensembl
Location	chr2:160194852 - 160194852(1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.229034
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000283249, ENST00000409583, ENST00000409872, ENST00000409967, ENST00000428609, ENST00000485635, ENST00000620391); NMD_transcript_variant(ENST00000409583); non_coding_transcript_variant(ENST00000485635)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ITGB6	integrin, beta 6	2q24.2	1(1/0/0)

SNPs in LD with rs3111397 (count: 0) View in gBrowse (chr2:160194852..160194852 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)