BDgene

SNP Report

Basic Info
Name rs2978041 dbSNP Ensembl
Location chr8:133594434 - 133594434(1)
Variant Alleles A/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.317692
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Zandi, P. P., 2007 A/C FBAT P-value = 0.043, GIST P-value > 0.05 in the initial sam...... FBAT P-value = 0.043, GIST P-value > 0.05 in the initial sample; FBAT P-value = 0.037, GIST P-value > 0.05 in the replication sample More... It is nominally (P<0.05) significant in the single SNP analy...... It is nominally (P<0.05) significant in the single SNP analysis by FBAT and HBAT; It was significantly associated in the replication sample by FBAT. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 8q24.22 4(3/0/1)

SNPs in LD with rs2978041 (count: 0) View in gBrowse (chr8:133594434..133594434 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)