BDgene

SNP Report

Basic Info
Name rs2945733 dbSNP Ensembl
Location chr8:133603507 - 133603507(1)
Variant Alleles T/G
Ancestral Allele G
Minor Allele T
Minor Allele Frequence 0.184105
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Zandi, P. P., 2007 A/C FBAT P-value = 0.001, GIST P-value = 0.05 under recessive mo...... FBAT P-value = 0.001, GIST P-value = 0.05 under recessive model in the initial sample; FBAT P-value = 0.428, GIST P-value > 0.05 in the replication sample More... It is nominally (P<0.05) significant in the single SNP analy...... It is nominally (P<0.05) significant in the single SNP analysis by FBAT and HBAT and it was identified associated at P<0.05 by using GIST in the initial sample, More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 8q24.22 4(3/0/1)

SNPs in LD with rs2945733 (count: 0) View in gBrowse (chr8:133603507..133603507 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016