SNP Report

Basic Info
Name rs2847316 dbSNP Ensembl
Location chr22:26241332 - 26241332(1)
Variant Alleles A/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.496805
Functional Annotation intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000248933, ENST00000343706, ENST00000360929, ENST00000404234, ENST00000529632, ENST00000629590); non_coding_transcript_exon_variant(ENST00000414989); non_coding_transcript_variant(ENST00000414989)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Xu, C.,2012 T Gene-gender interaction:OR = 0.86,P-value = 0.0045;Male:OR =...... Gene-gender interaction:OR = 0.86,P-value = 0.0045;Male:OR = 1.01,P-value = 0.92;Female:OR = 0.76,P-value = 0.0026,P-value corrected = 0.042 More... 16 SNPsshowedsignificantgenexgenderinteractionsinfluencingBD...... 16 SNPsshowedsignificantgenexgenderinteractionsinfluencingBD-I(P<0.01). More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SEZ6L seizure related 6 homolog (mouse)-like 22q12.1 1(1/0/0)

SNPs in LD with rs2847316 (count: 0) View in gBrowse (chr22:26241332..26241332 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)