SNP Report

Basic Info

Name	rs2808579 dbSNP Ensembl
Location	chr1:231531522 - 231531522(1)
Variant Alleles	T/A
Ancestral Allele	A
Minor Allele	T
Minor Allele Frequence	0.45647
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000366639, ENST00000413309, ENST00000476913, ENST00000602567, ENST00000602634, ENST00000602825, ENST00000602885, ENST00000602956, ENST00000602962); NMD_transcript_variant(ENST00000602567, ENST00000602634, ENST00000602885, ENST00000602956, ENST00000602962); non_coding_transcript_variant(ENST00000476913, ENST00000602825); upstream_gene_variant(ENST00000416221, ENST00000425412, ENST00000440665, ENST00000450783, ENST00000454631, ENST00000475168)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TSNAX	translin-associated factor X	1q42.2	4(3/1/0)

SNPs in LD with rs2808579 (count: 0) View in gBrowse (chr1:231531522..231531522 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)