SNP Report

Basic Info

Name	rs2523721 dbSNP Ensembl
Location	chrCHR_HSCHR6_MHC_SSTO_CTG1:30188839 - 30188839(1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	T
Minor Allele Frequence	0.230232
Functional Annotation	downstream_gene_variant; synonymous_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000418026, ENST00000434785, ENST00000487829); synonymous_variant(ENST00000416596, ENST00000437089, ENST00000453195, ENST00000454678, ENST00000440149, ENST00000453442, ENST00000484938, ENST00000422802, ENST00000425523, ENST00000438064, ENST00000439094, ENST00000456770, ENST00000422881, ENST00000435387, ENST00000475230, ENST00000436219, ENST00000438908, ENST00000446196, ENST00000451189, ENST00000455000, ENST00000429583, ENST00000433836, ENST00000486529, ENST00000415966, ENST00000433314, ENST00000438785, ENST00000447711, ENST00000456093, ENST00000431641, ENST00000433361, ENST00000477569, ENST00000415923, ENST00000428486, ENST00000446540, ENST00000450103, ENST00000450392, ENST00000419401, ENST00000445457, ENST00000481596, ENST00000424124, ENST00000425831, ENST00000432326, ENST00000438384, ENST00000449136, ENST00000419171, ENST00000427612, ENST00000461313, ENST00000327357, ENST00000383607, ENST00000396558, ENST00000412755, ENST00000415789, ENST00000447942, ENST00000477353, ENST00000422349, ENST00000423901, ENST00000427535, ENST00000444979, ENST00000445259)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TRIM26	tripartite motif containing 26	6p21.3	2(2/0/0)

SNPs in LD with rs2523721 (count: 0) View in gBrowse (chrCHR_HSCHR6_MHC_SSTO_CTG1:30188839..30188839 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)