SNP Report

Basic Info
Name rs2469515 dbSNP Ensembl
Location chr8:132137856 - 132137856(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.110423
Functional Annotation intron_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000388996, ENST00000519445, ENST00000519589, ENST00000521134, ENST00000621976); non_coding_transcript_variant(ENST00000519589)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Koefoed, P.,2011 Chi-square test: P-value = 0.017 Chi-square test: P-value = 0.017 Significant association was found in genotype association. Significant association was found in genotype association. Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
KCNQ3 potassium channel, voltage gated KQT-like subfamily Q, member 3 8q24 4(3/0/1)

SNPs in LD with rs2469515 (count: 0) View in gBrowse (chr8:132137856..132137856 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)