SNP Report

Basic Info

Name	rs2469515 dbSNP Ensembl
Location	chr8:132137856 - 132137856(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.110423
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000388996, ENST00000519445, ENST00000519589, ENST00000521134, ENST00000621976); non_coding_transcript_variant(ENST00000519589)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Koefoed, P.,2011			Chi-square test: P-value = 0.017 Chi-square test: P-value = 0.017	Significant association was found in genotype association. Significant association was found in genotype association.	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
KCNQ3	potassium channel, voltage gated KQT-like subfamily Q, member 3	8q24	4(3/0/1)

SNPs in LD with rs2469515 (count: 0) View in gBrowse (chr8:132137856..132137856 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)