SNP Report

Basic Info

Name	rs2390129 dbSNP Ensembl
Location	chr13:98975826 - 98975826(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.160543
Functional Annotation	intron_variant; NMD_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000339416, ENST00000376460, ENST00000427887, ENST00000442173, ENST00000448493, ENST00000479769, ENST00000627024, ENST00000630992); NMD_transcript_variant(ENST00000339416, ENST00000479769, ENST00000630992)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Detera-Wadleigh, S. D., 2007			TDT P-value = 0.01996 in initial families, FBAT-e P-value = ...... TDT P-value = 0.01996 in initial families, FBAT-e P-value = 0.0558 in NIMH1-2 More...	TDT analysis detected association with bipolar disorder TDT analysis detected association with bipolar disorder	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
DOCK9	dedicator of cytokinesis 9	13q32.3	1(1/0/0)

SNPs in LD with rs2390129 (count: 0) View in gBrowse (chr13:98975826..98975826 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)