SNP Report

Basic Info

Name	rs2296147 dbSNP Ensembl
Location	chr13:102846025 - 102846025(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.297923
Functional Annotation	5_prime_UTR_variant; downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript	5_prime_UTR_variant(ENST00000355739, ENST00000535557, LRG_464t1); downstream_gene_variant(ENST00000257336, ENST00000448849); intron_variant(ENST00000602836); upstream_gene_variant(ENST00000375958, ENST00000472151)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Ferraren, D. O.,2005		C	Assocaition study: TDT P-value = 0.9 for CNG Series, TDT P-v...... Assocaition study: TDT P-value = 0.9 for CNG Series, TDT P-value = 0.44 for NIMH 1 and 2; chi quare test P-value > 0.05 in case-control study More...	No significant association was observed in BD. No significant association was observed in BD.	Negative

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
BIVM-ERCC5	BIVM-ERCC5 readthrough	13q33.1	Mapped by Literature SNP
BIVM	basic, immunoglobulin-like variable motif containing	13q33.1	Mapped by Literature SNP
ERCC5	excision repair cross-complementation group 5	13q22-q34	Mapped by Literature SNP

SNPs in LD with rs2296147 (count: 0) View in gBrowse (chr13:102846025..102846025 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)