SNP Report

Basic Info

Name	rs2279381 dbSNP Ensembl
Location	chr6:122780399 - 122780399(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.00698882
Functional Annotation	missense_variant. Polyphen Annotation: probably damaging(ENST00000356535); possibly damaging(ENST00000368444) SIFT Annotation: deleterious(ENST00000368444, ENST00000356535)
Consequence to Transcript	missense_variant(ENST00000368444, ENST00000356535)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Iwayama, Y., 2010	T/C		P-value for allele test is 0.4937, p-value for genotype test...... P-value for allele test is 0.4937, p-value for genotype test is 0.4869, p-value is 0.9998 after correction by permutation test. More...		Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
FABP7	fatty acid binding protein 7, brain	6q22-q23	1(1/0/0)

SNPs in LD with rs2279381 (count: 0) View in gBrowse (chr6:122780399..122780399 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)