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SNP Report
Name | rs2273773 dbSNP Ensembl | ||
---|---|---|---|
Location | chr10:67906841 - 67906841(1) | ||
Variant Alleles | T/C | ||
Ancestral Allele | T | ||
Minor Allele | C | ||
Minor Allele Frequence | 0.127196 | ||
Functional Annotation | non_coding_transcript_exon_variant; non_coding_transcript_variant; synonymous_variant. | ||
Consequence to Transcript | non_coding_transcript_exon_variant(ENST00000473922); non_coding_transcript_variant(ENST00000473922); synonymous_variant(ENST00000212015, ENST00000403579, ENST00000406900, ENST00000432464) | ||
No. of Studies | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | YES | ||
Overlap with MDD? | NO |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
Kishi, T.,2011(a) | For SZ, X2 test:genotype, X2(2df)=0.0744, P-value = 0.963;allele, X2(2df)=0.0644, P-value = 0.8 | No significant association was observed. | Negative |