Search SNP
Search Gene
Search CNV
Search Haplotype
Search Other Variant
Search Region
Search Pathway
Search Study
SNP Report
Name | rs2254884 dbSNP Ensembl | ||
---|---|---|---|
Location | chr9:104819468 - 104819468(1) | ||
Variant Alleles | A/C | ||
Ancestral Allele | A | ||
Minor Allele | C | ||
Minor Allele Frequence | 0.283347 | ||
Functional Annotation | intron_variant. | ||
Consequence to Transcript | intron_variant(ENST00000374736) | ||
No. of Studies | 1 (Positive: 1; Negative: 0; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | YES | ||
Overlap with MDD? | NO |
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
Andreassen OA, 2013 | Conditional FDR; SCZ loci given BD: P-value=0.000117, FDR=0.203, FDR=0.032 for SCZ and BD | To estimate the number of independent loci, we 'pruned' the associated SNPs (removed SNPs with linkage disequilibrium (LD)>0.2), and identified a total of 58 independent loci with a significance threshold of conditional FDR<0.32. | Positive |