SNP Report

Basic Info

Name	rs2249372 dbSNP Ensembl
Location	chr7:103597763 - 103597763(1)
Variant Alleles	A/G
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.224441
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000343529, ENST00000424685, ENST00000428762)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Goes, F. S., 2010		A	TDT test: P-value = 0.039 OR=1.22[1.01-1.48] for all samples...... TDT test: P-value = 0.039 OR=1.22[1.01-1.48] for all samples, P-value = 0.014 OR=1.36[1.06-1.73] for females, P-value = 0.82 OR=1.04[0.77-1.40] for males. More...	nominal significant, but not significant after empirical cor...... nominal significant, but not significant after empirical correction for testing of multiple markers. More...	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
RELN	reelin	7q22	3(1/2/0)

SNPs in LD with rs2249372 (count: 0) View in gBrowse (chr7:103597763..103597763 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)