SNP Report

Basic Info
Name rs2149356 dbSNP Ensembl
Location chr9:117711921 - 117711921(1)
Variant Alleles T/G
Ancestral Allele T
Minor Allele T
Minor Allele Frequence 0.478834
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000490685); intron_variant(ENST00000355622, ENST00000394487, ENST00000472304); non_coding_transcript_variant(ENST00000472304); upstream_gene_variant(ENST00000364574)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
RNU6-1082P RNA, U6 small nuclear 1082, pseudogene 9q33.1 Mapped by LD-proxy
TLR4 toll-like receptor 4 9q33.1 1(1/0/0)

SNPs in LD with rs2149356 (count: 0) View in gBrowse (chr9:117711921..117711921 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)