SNP Report

Basic Info
Name rs2135078 dbSNP Ensembl
Location chr5:76969643 - 76969643(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele Frequence 0.0
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000274368, ENST00000503763); intron_variant(ENST00000514258); non_coding_transcript_variant(ENST00000514258)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Ceulemans, S.,2011 T/C Single SNP analyses: Permuted P-value = 0.05659, Odds Ratio=...... Single SNP analyses: Permuted P-value = 0.05659, Odds Ratio=1.26 More... No significant association was observed. No significant association was observed. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CRHBP corticotropin releasing hormone binding protein 5q13.3 1(0/1/0)

SNPs in LD with rs2135078 (count: 3) View in gBrowse (chr5:76968168..76969697 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 3)

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)