BDgene

SNP Report

Basic Info
Name rs2070704 dbSNP Ensembl
Location chr1:160142348 - 160142348(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.21246
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000361216, ENST00000447527, LRG_6t1); downstream_gene_variant(ENST00000392233, ENST00000459972, ENST00000463989)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Goldstein, I.,2009 A/G Single SNP association: additive model: FBAT P-value = 0.023...... Single SNP association: additive model: FBAT P-value = 0.0236; dominant model: FBAT P value=0.0158; recessive model: FBAT P-value = 0.0158; heterozygote model: FBAT P-value = 0.022 More... The SNP was significantly associated with BD in several mode...... The SNP was significantly associated with BD in several modes. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide 1q23.2 1(1/0/0)

SNPs in LD with rs2070704 (count: 0) View in gBrowse (chr1:160142348..160142348 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)