BDgene

SNP Report

Basic Info
Name rs2066001 dbSNP Ensembl
Location chr1:169314888 - 169314888(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele G
Minor Allele Frequence 0.179313
Functional Annotation intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000367811, ENST00000432081, ENST00000469474, ENST00000472647, ENST00000480478, ENST00000485609, ENST00000491225, ENST00000524967, ENST00000525440, ENST00000527460, ENST00000528517); NMD_transcript_variant(ENST00000525440, ENST00000528517); non_coding_transcript_variant(ENST00000432081, ENST00000469474, ENST00000480478, ENST00000485609, ENST00000491225, ENST00000524967, ENST00000527460); upstream_gene_variant(ENST00000483228)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NME7 NME/NM23 family member 7 1q24.2 1(0/1/0)

SNPs in LD with rs2066001 (count: 0) View in gBrowse (chr1:169314888..169314888 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)