SNP Report

Basic Info

Name	rs1883565 dbSNP Ensembl
Location	chr1:19682014 - 19682014(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.425719
Functional Annotation	downstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000289753, ENST00000294543, ENST00000375127, ENST00000489814)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TMCO4	transmembrane and coiled-coil domains 4	1p36.13	Mapped by LD-proxy
HTR6	5-hydroxytryptamine (serotonin) receptor 6, G protein-coupled	1p36-p35	3(1/2/0)

SNPs in LD with rs1883565 (count: 0) View in gBrowse (chr1:19682014..19682014 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)