BDgene

SNP Report

Basic Info
Name rs17561681 dbSNP Ensembl
Location chr15:26933328 - 26933328(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.0173722
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000335625, ENST00000355395, ENST00000400081, ENST00000541819, ENST00000555182)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Craddock, N., 2010 Nominal P-value = 0.00016 Nominal P-value = 0.00016 showed significant levels independent of the association at ...... showed significant levels independent of the association at the index SNP, rs7680321. More... Positive

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5 15q12 6(6/0/0)
GABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3 15q12 3(1/2/0)

SNPs in LD with rs17561681 (count: 0) View in gBrowse (chr15:26933328..26933328 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)