BDgene

SNP Report

Basic Info
Name rs174575 dbSNP Ensembl
Location chr11:61834531 - 61834531(1)
Variant Alleles C/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.209265
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000257261, ENST00000278840, ENST00000517312, ENST00000518606, ENST00000521849, ENST00000522056)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Forstner, A. J., 2015 P-value=2.85E-5 P-value=2.85E-5 After correction for multiple testing, nine miRNAs showed a ...... After correction for multiple testing, nine miRNAs showed a significant association with BD. More... Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
FADS2 fatty acid desaturase 2 11q12.2 Mapped by Literature SNP

SNPs in LD with rs174575 (count: 3) View in gBrowse (chr11:61834531..61850204 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 3)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016