SNP Report

Basic Info

Name	rs17408276 dbSNP Ensembl
Location	chr15:78589276 - 78589276(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.208866
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000348639, ENST00000559002, ENST00000559658); intron_variant(ENST00000299565, ENST00000394802, ENST00000559554); non_coding_transcript_exon_variant(ENST00000567141); non_coding_transcript_variant(ENST00000567141); upstream_gene_variant(ENST00000559576)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CHRNA5	cholinergic receptor, nicotinic, alpha 5 (neuronal)	15q24	3(2/1/0)
CHRNA3	cholinergic receptor, nicotinic, alpha 3 (neuronal)	15q24	3(1/2/0)

SNPs in LD with rs17408276 (count: 0) View in gBrowse (chr15:78589276..78589276 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)