SNP Report

Basic Info
Name rs16981995 dbSNP Ensembl
Location chr22:26382781 - 26382781(1)
Variant Alleles C/T
Ancestral Allele T
Minor Allele T
Minor Allele Frequence 0.0185703
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000360929, ENST00000529632); downstream_gene_variant(ENST00000248933, ENST00000343706, ENST00000402979, ENST00000403121, ENST00000404234, ENST00000629590)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Xu, C.,2012 A Gene-gender interaction:OR = 1.68,P-value = 0.0041;Male:OR =...... Gene-gender interaction:OR = 1.68,P-value = 0.0041;Male:OR = 1.41,P-value = 0.32;Female:OR = 3.17,P-value = 0.004,P-value corrected = 0.064 More... 16 SNPsshowedsignificantgenexgenderinteractionsinfluencingBD...... 16 SNPsshowedsignificantgenexgenderinteractionsinfluencingBD-I(P<0.01). More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SEZ6L seizure related 6 homolog (mouse)-like 22q12.1 1(1/0/0)

SNPs in LD with rs16981995 (count: 2) View in gBrowse (chr22:26379543..26382781 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)