BDgene

SNP Report

Basic Info
Name rs16971413 dbSNP Ensembl
Location chr15:40996080 - 40996080(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.091254
Functional Annotation downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000557849); intron_variant(ENST00000361937, ENST00000401393, ENST00000558357, ENST00000560799, ENST00000561244, ENST00000616814); NMD_transcript_variant(ENST00000558357); non_coding_transcript_variant(ENST00000560799, ENST00000561244); upstream_gene_variant(ENST00000561388)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
INO80 INO80 complex subunit 15q15.1 1(0/1/0)

SNPs in LD with rs16971413 (count: 0) View in gBrowse (chr15:40996080..40996080 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)