BDgene

SNP Report

Basic Info
Name rs16844790 dbSNP Ensembl
Location chr2:160112117 - 160112117(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele G
Minor Allele Frequence 0.214457
Functional Annotation 3_prime_UTR_variant; NMD_transcript_variant; synonymous_variant; upstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000409583); NMD_transcript_variant(ENST00000409583); synonymous_variant(ENST00000283249, ENST00000409872, ENST00000409967, ENST00000428609, ENST00000620391); upstream_gene_variant(ENST00000475438)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ITGB6 integrin, beta 6 2q24.2 1(1/0/0)

SNPs in LD with rs16844790 (count: 0) View in gBrowse (chr2:160112117..160112117 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)