SNP Report

Basic Info

Name	rs16840892 dbSNP Ensembl
Location	chr4:7714334 - 7714334(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.109425
Functional Annotation	missense_variant. Polyphen Annotation: benign(ENST00000329016, ENST00000507866) SIFT Annotation: tolerated(ENST00000329016, ENST00000507866)
Consequence to Transcript	missense_variant(ENST00000329016, ENST00000507866)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Takata, A.,2011(a)	T/C		Fisher's exact test: allele P-value = 0.8695, genotype P-val...... Fisher's exact test: allele P-value = 0.8695, genotype P-value = 0.748 More...	No significant association was observed in BD. No significant association was observed in BD.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SORCS2	sortilin-related VPS10 domain containing receptor 2	4p16.1	5(3/2/0)

SNPs in LD with rs16840892 (count: 0) View in gBrowse (chr4:7714334..7714334 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)