SNP Report

Basic Info
Name rs1534891 dbSNP Ensembl
Location chr22:38299094 - 38299094(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.106829
Functional Annotation downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000430335); intron_variant(ENST00000359867, ENST00000396832, ENST00000400206, ENST00000403904, ENST00000405675, ENST00000413574, ENST00000431611, ENST00000442216, ENST00000451964, ENST00000498529, ENST00000612795); NMD_transcript_variant(ENST00000431611, ENST00000442216); non_coding_transcript_variant(ENST00000498529, ENST00000612795); upstream_gene_variant(ENST00000366216, ENST00000431632, ENST00000494610, ENST00000495232)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CSNK1E casein kinase 1, epsilon 22q13.1 5(1/3/1)

SNPs in LD with rs1534891 (count: 0) View in gBrowse (chr22:38299094..38299094 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)