BDgene

SNP Report

Basic Info
Name rs1477156 dbSNP Ensembl
Location chr2:75202015 - 75202015(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.428714
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000305249, ENST00000409848)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Sharp S.I., 2014 T/C P-value=0.8, OR=0.98, 95%CI=0.81-1.18 P-value=0.8, OR=0.98, 95%CI=0.81-1.18 No significant association was observed. No significant association was observed. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
TACR1 tachykinin receptor 1 2p13.1-p12 3(3/0/0)

SNPs in LD with rs1477156 (count: 0) View in gBrowse (chr2:75202015..75202015 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)